MolNFT v1 · #139433 · protein
Crystal structure of beta-arabinopyranosidase
5XFM: “Crystal structure of beta-arabinopyranosidase”. X-ray diffraction, 1 ligand (CA). MolNFT v1 #139433 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5XFM
- Type
- protein
- Length
- 2,521 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A1H5YQC4
- Ligands
- CA
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, C | — | protein | 632 | — | A0A1H5YQC4 |
| B | — | protein | 628 | — | A0A1H5YQC4 |
| D | — | protein | 629 | — | A0A1H5YQC4 |
Ligands and binding sites
- CA · Calcium ion · metal · 4 copies · chains A, B, C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5XFM · Crystal structure of beta-arabinopyranosidase · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A1H5YQC4
- Elsewhere: RCSB PDB 5XFM · PDBe 5XFM · UniProt A0A1H5YQC4
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