MolNFT v1 · #13941 · protein
Ktn BSU222 crystal structure in complex with NADH
1LSU · Conserved hypothetical protein yuaa: “Ktn BSU222 crystal structure in complex with NADH”. X-ray diffraction, 1 ligand (NAI), 2 pockets (best druggability 0.52). MolNFT v1 #13941 on GenesisL1: 3D structure, binding sites and pockets…
- PDB
- 1LSU
- Type
- protein
- Length
- 268 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Conserved hypothetical protein yuaa
- UniProt
- O32080
- Ligands
- NAI
- Pockets
- 2 · best druggability 0.52
Structure
x-ray diffraction · 1 distinct chain · 47% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Conserved hypothetical protein yuaa | protein | 134 | 47% helix, 19% strand | O32080 |
Ligands and binding sites
- NAI · 1,4-dihydronicotinamide adenine dinucleotide · ligand · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 189 | 0.52 | 0.78 | 39 | NAI |
| 2 | 92 | 0.39 | 0.77 | 25 | NAI |
Interfaces
1 interface between chains.
- A–B · 1660 Ų buried · 9 hydrogen bonds · protein-protein
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O32080
- Elsewhere: RCSB PDB 1LSU · PDBe 1LSU · UniProt O32080
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