MolNFT v1 · #13937 · protein

The crystal structure of a bulgecin-inhibited G-type lysozyme from the egg-white of the australian black swan. a comparison of the binding of bulgecin to three muramidases

1LSP: “The crystal structure of a bulgecin-inhibited G-type lysozyme from the egg-white of the australian black…”. X-ray diffraction, 1 ligand (BUL), 1 pocket (best druggability 0.54). MolNFT v1 #13937 on GenesisL1: 3D structure, binding…

PDB: 1LSP
Type: protein
Length: 185 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Lysozyme
EC: 3.2.1.17
UniProt: P00717
Ligands: BUL
Pockets: 1 · best druggability 0.54

Structure

x-ray diffraction · 1 distinct chain · 53% helix, 4% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Lysozyme (EC 3.2.1.17)	protein	185	53% helix, 4% strand	P00717

Ligands and binding sites

BUL · Bulgecin A · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	276	0.54	0.76	37	BUL

Modifications

Observed in the structure: 2 disulfide (disulfide).

Compared structures

1LSP · The crystal structure of a bulgecin-inhibited G-type lysozyme from the egg-white of the… · the same entry in another collection · chain A against A, TM-score 1.00
P00717 · AlphaFold monomer V2.0 prediction for lysozyme G (P00717) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P00717
Elsewhere: RCSB PDB 1LSP · PDBe 1LSP · UniProt P00717

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