MolNFT v1 · #138964 · protein
Structure of a eukaryotic voltage-gated sodium channel at near atomic resolution
5X0M: “Structure of a eukaryotic voltage-gated sodium channel at near atomic resolution”. Electron microscopy, 2 ligands (NAG, BMA). MolNFT v1 #138964 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5X0M
- Type
- protein
- Length
- 1,323 residues
- Chains
- 1
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- D0E0C2
- Ligands
- NAG, BMA
Structure
electron microscopy · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 1323 | — | D0E0C2 |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 13 copies · chains A
- BMA · beta-D-mannopyranose · sugar · 7 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5X0M · Structure of a eukaryotic voltage-gated sodium channel at near atomic resolution · the same entry in another collection · chain A against A, TM-score 1.00
- D0E0C2 · AlphaFold monomer V2.0 prediction for sodium channel protein PAFPC1 (D0E0C2) · a predicted model of the same protein · chain A against A, TM-score 0.92
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt D0E0C2
- Elsewhere: RCSB PDB 5X0M · PDBe 5X0M · UniProt D0E0C2
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