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MolNFT v1 · #138907 · protein

Structure of amino acid racemase, 2.65 a

5WYA: “Structure of amino acid racemase, 2.65 a”. X-ray diffraction. MolNFT v1 #138907 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
5WYA
Type
protein
Length
1,762 residues
Chains
4
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
M1GRN3

Structure

x-ray diffraction · 2 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A, D—protein440—M1GRN3
B, C—protein441—M1GRN3

Ligands and binding sites

  • DMS · Dimethyl sulfoxide · additive · 11 copies · chains A, C, D, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 5WYA · Structure of amino acid racemase, 2.65 A · the same entry in another collection · chain C against C, TM-score 1.00
  • M1GRN3 · AlphaFold monomer V2.0 prediction for isoleucine 2-epimerase (M1GRN3) · a predicted model of the same protein · chain A against A, TM-score 1.00

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