MolNFT v1 · #138853 · protein
Crystal structure of TSR1
5WWN · Ribosome biogenesis protein TSR1: “Crystal structure of TSR1”. X-ray diffraction, 1 ligand (SO4), 8 pockets (best druggability 0.56). MolNFT v1 #138853 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5WWN
- Type
- protein
- Length
- 531 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Ribosome biogenesis protein TSR1
- UniProt
- Q07381
- Ligands
- SO4
- Pockets
- 8 · best druggability 0.56
Structure
x-ray diffraction · 1 distinct chain · 22% helix, 37% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosome biogenesis protein TSR1 | protein | 531 | 22% helix, 37% strand | Q07381 |
Ligands and binding sites
- SO4 · Sulfate ion · ion · 10 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
8 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 198 | 0.56 | 0.79 | 21 | empty |
| 2 | 88 | 0.53 | 0.84 | 24 | empty |
| 3 | 82 | 0.41 | 0.79 | 18 | empty |
| 4 | 131 | 0.40 | 0.74 | 21 | empty |
| 5 | 57 | 0.38 | 0.80 | 18 | empty |
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q07381
- Elsewhere: RCSB PDB 5WWN · PDBe 5WWN · UniProt Q07381
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.