MolNFT v1 · #138548 · protein
Crystal structure of an adenylation domain interrupted by a methylation domain (AMA4) from nonribosomal peptide synthetase tios
5WMM: “Crystal structure of an adenylation domain interrupted by a methylation domain (AMA4) from nonribosomal…”. X-ray diffraction, 3 ligands (B6G, CA, CL). MolNFT v1 #138548 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5WMM
- Type
- protein
- Length
- 935 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q333U7, Q333U6
- Ligands
- B6G, CA, CL
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 871 | — | Q333U7 |
| B | — | protein | 64 | — | Q333U6 |
Ligands and binding sites
- B6G · (2S)-2-amino-3-methylbutanoyl (2S,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl hydrogen (S)-phosphate · ligand · chains A
- CA · Calcium ion · metal · 3 copies · chains A
- CL · Chloride ion · ion · 3 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5WMM · Crystal structure of an adenylation domain interrupted by a methylation domain (AMA4)… · the same entry in another collection · chain B against B, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q333U7
- Every structure of UniProt Q333U6
- Elsewhere: RCSB PDB 5WMM · PDBe 5WMM · UniProt Q333U7 · UniProt Q333U6
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