MolNFT v1 · #138407 · protein
Crystal structure of kl with an agonist Fab
5WI9: “Crystal structure of kl with an agonist Fab”. X-ray diffraction, 2 ligands (NAG, SO4). MolNFT v1 #138407 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5WI9
- Type
- protein
- Length
- 1,680 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q86Z14
- Ligands
- NAG, SO4
Structure
x-ray diffraction · 5 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | — | protein | 425 | — | Q86Z14 |
| L | — | protein | 188 | — | — |
| H | — | protein | 217 | — | — |
| E | — | protein | 212 | — | — |
| F | — | protein | 213 | — | — |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 4 copies · chains A, B
- SO4 · Sulfate ion · ion · 2 copies · chains A, B
- EDO · 1,2-ethanediol · additive · 7 copies · chains A, B, L, H
- PG4 · Tetraethylene glycol · additive · 2 copies · chains A, L, H
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q86Z14
- Elsewhere: RCSB PDB 5WI9 · PDBe 5WI9 · UniProt Q86Z14
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.