MolNFT v1 · #138367 · protein
Apo form of the C-terminal region of human transcription factor iib
5WH1: “Apo form of the C-terminal region of human transcription factor iib”. X-ray diffraction, 1 ligand (SO4). MolNFT v1 #138367 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5WH1
- Type
- protein
- Length
- 836 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q00403
- Ligands
- SO4
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 206 | — | Q00403 |
| B, C, D | — | protein | 210 | — | Q00403 |
Ligands and binding sites
- SO4 · Sulfate ion · ion · 26 copies · chains A, B, C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5WH1 · Apo form of the C-terminal region of human Transcription Factor IIB · the same entry in another collection · chain A against A, TM-score 1.00
- Q00403 · AlphaFold monomer V2.0 prediction for transcription initiation factor iib (Q00403) · a predicted model of the same protein · chain B against A, TM-score 0.64
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q00403
- Elsewhere: RCSB PDB 5WH1 · PDBe 5WH1 · UniProt Q00403
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