MolNFT v1 · #137935 · protein

SH2B1 SH2 domain

5W3R · SH2B adapter protein 1: “SH2B1 SH2 domain”. X-ray diffraction, 2 ligands (IPH, PO4). MolNFT v1 #137935 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5W3R
Type: protein
Length: 114 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: SH2B adapter protein 1
UniProt: Q9NRF2
Ligands: IPH, PO4

Structure

x-ray diffraction · 1 distinct chain · 23% helix, 32% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	SH2B adapter protein 1	protein	114	23% helix, 32% strand	Q9NRF2

Ligands and binding sites

IPH · Phenol · ligand · 3 copies · chains A
PO4 · Phosphate ion · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

5W3R · SH2B1 SH2 Domain · the same entry in another collection · chain A against A, TM-score 1.00
Q9NRF2 · AlphaFold monomer V2.0 prediction for SH2B adapter protein 1 (Q9NRF2) · a predicted model of the same protein · chain A against A, TM-score 0.88

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9NRF2
Elsewhere: RCSB PDB 5W3R · PDBe 5W3R · UniProt Q9NRF2

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