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MolNFT v1 · #137716 · protein

BCL-xl in complex with bim-H3PC-rt

5VX3: “BCL-xl in complex with bim-H3PC-rt”. X-ray diffraction. MolNFT v1 #137716 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
5VX3
Type
protein
Length
661 residues
Chains
8
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
Q07817, O43521

Structure

x-ray diffraction · 6 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein140—Q07817
B—protein21—O43521
C—protein141—Q07817
D, F—protein22—O43521
E, G—protein146—Q07817
H—protein23—O43521

Ligands and binding sites

  • EDO · 1,2-ethanediol · additive · 13 copies · chains A, E, D, C, G, F, H

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 5VX3 · Bcl-xL in complex with Bim-h3Pc-RT · the same entry in another collection · chain H against H, TM-score 1.00
  • Q07817 · AlphaFold monomer V2.0 prediction for BCL-2-like protein 1 (Q07817) · a predicted model of the same protein · chain A against A, TM-score 0.81

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