MolNFT v1 · #137708 · protein
Bak core latch dimer in complex with bim-BH3 - cubic
5VWV: “Bak core latch dimer in complex with bim-BH3 - cubic”. X-ray diffraction, 1 ligand (CL). MolNFT v1 #137708 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5VWV
- Type
- protein
- Length
- 195 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q16611, O43521
- Ligands
- CL
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 170 | — | Q16611 |
| B | — | protein | 25 | — | O43521 |
Ligands and binding sites
- CL · Chloride ion · ion · chains A, B
- EDO · 1,2-ethanediol · additive · 6 copies · chains A, B
- TFA · trifluoroacetic acid · additive · chains A, B
- GOL · Glycerol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5VWV · Bak core latch dimer in complex with Bim-BH3 - Cubic · the same entry in another collection · chain A against A, TM-score 1.00
- O43521 · AlphaFold monomer V2.0 prediction for BCL-2-like protein 11 (O43521) · a predicted model of the same protein · chain B against A, TM-score 0.80
- Q16611 · AlphaFold monomer V2.0 prediction for BCL-2 homologous ANTAGONIST/KILLER (Q16611) · a predicted model of the same protein · chain A against A, TM-score 0.71
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q16611
- Every structure of UniProt O43521
- Elsewhere: RCSB PDB 5VWV · PDBe 5VWV · UniProt Q16611 · UniProt O43521
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