MolNFT v1 · #137377 · protein

Cryoem structure of xenopus KCNQ1 channel

5VMS: “Cryoem structure of xenopus KCNQ1 channel”. Electron microscopy, 1 ligand (CA). MolNFT v1 #137377 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5VMS
Type: protein
Length: 484 residues
Chains: 2
Method: electron microscopy
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: P70057, P62158
Ligands: CA

Structure

electron microscopy · 2 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	343	—	P70057
B	—	protein	141	—	P62158

Ligands and binding sites

CA · Calcium ion · metal · 3 copies · chains B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

5VMS · CryoEM structure of Xenopus KCNQ1 channel · the same entry in another collection · chain A against A, TM-score 1.00
P70057 · AlphaFold monomer V2.0 prediction for potassium voltage-gated channel subfamily kqt… · a predicted model of the same protein · chain A against A, TM-score 0.96

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P70057
Every structure of UniProt P62158
Elsewhere: RCSB PDB 5VMS · PDBe 5VMS · UniProt P70057 · UniProt P62158

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