MolNFT v1 · #137265 · protein
Backbone structure of the yersinia pestis outer membrane protein ail in phospholipid bilayer nanodisc
5VJ8 · Adhesion invasion locus: “Backbone structure of the yersinia pestis outer membrane protein ail in phospholipid bilayer nanodisc”. Solution nmr, 3 pockets (best druggability 0.52). MolNFT v1 #137265 on GenesisL1: 3D structure…
- PDB
- 5VJ8
- Type
- protein
- Length
- 156 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Adhesion invasion locus
- UniProt
- A0A154RMF1
- Pockets
- 3 · best druggability 0.52
Structure
solution nmr · 1 distinct chain · 0% helix, 56% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Adhesion invasion locus | protein | 156 | 0% helix, 56% strand | A0A154RMF1 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 167 | 0.52 | 0.79 | 26 | empty |
| 2 | 163 | 0.47 | 0.77 | 23 | empty |
| 3 | 85 | 0.35 | 0.75 | 17 | empty |
Compared structures
- 5VJ8 · Backbone structure of the Yersinia pestis outer membrane protein Ail in phospholipid… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A154RMF1
- Elsewhere: RCSB PDB 5VJ8 · PDBe 5VJ8 · UniProt A0A154RMF1
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