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Backbone structure of the yersinia pestis outer membrane protein ail in phospholipid bilayer nanodisc
Analyse Backbone structure of the yersinia pestis outer membrane protein ail in… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5VJ8
- Type
- protein
- Length
- 156 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Adhesion invasion locus
- UniProt
- A0A154RMF1
- Pockets
- 3 · best druggability 0.52
Structure
solution nmr · 1 distinct chain · 0% helix, 56% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Adhesion invasion locus | protein | 156 | 0% helix, 56% strand | A0A154RMF1 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 167 | 0.52 | 0.79 | 26 | empty |
| 2 | 163 | 0.47 | 0.77 | 23 | empty |
| 3 | 85 | 0.35 | 0.75 | 17 | empty |
Compared structures
- 5VJ8 · Backbone structure of the Yersinia pestis outer membrane protein Ail in phospholipid… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A154RMF1
- Elsewhere: RCSB PDB 5VJ8 · PDBe 5VJ8 · UniProt A0A154RMF1
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