MolNFT v1 · #136983 · protein
Human pancreatic alpha amylase in complex with peptide inhibitor piha- L5(D10Y)
5VA9: “Human pancreatic alpha amylase in complex with peptide inhibitor piha- L5(D10Y)”. X-ray diffraction, 4 ligands (ACE, CA, NH2). MolNFT v1 #136983 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5VA9
- Type
- protein
- Length
- 1,028 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P04746
- Ligands
- ACE, CA, NH2, CL
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | — | protein | 496 | — | P04746 |
| C, D | — | protein | 18 | — | — |
Ligands and binding sites
- ACE · Acetyl group · ligand · 2 copies · chains C, D
- CA · Calcium ion · metal · 2 copies · chains A, B
- NH2 · Amino group · ion · 2 copies · chains C, D
- CL · Chloride ion · ion · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5VA9 · Human pancreatic alpha amylase in complex with peptide inhibitor piHA-L5(d10Y) · the same entry in another collection · chain A against A, TM-score 1.00
- P04746 · AlphaFold monomer V2.0 prediction for pancreatic alpha-amylase (P04746) · a predicted model of the same protein · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P04746
- Elsewhere: RCSB PDB 5VA9 · PDBe 5VA9 · UniProt P04746
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