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MolNFT v1 · #136686 · protein

Crystal structure of the act domain of prephenate dehydrogenase tyra from bacillus anthracis

5V0S: “Crystal structure of the act domain of prephenate dehydrogenase tyra from bacillus anthracis”. X-ray diffraction, 2 ligands (CA, SO4). MolNFT v1 #136686 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
5V0S
Type
protein
Length
138 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Prephenate dehydrogenase
EC
1.3.1.12
UniProt
Q81P63
Ligands
CA, SO4

Structure

x-ray diffraction · 1 distinct chain · 39% helix, 26% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
A, BPrephenate dehydrogenase (EC 1.3.1.12)protein6939% helix, 26% strandQ81P63

Ligands and binding sites

  • CA · Calcium ion · metal · 2 copies · chains A, B
  • SO4 · Sulfate ion · ion

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

1 interface between chains.

  • A–B · 669 Ų buried · 11 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 2 modified (engineered).

Compared structures

  • 5V0S · Crystal structure of the ACT domain of prephenate dehydrogenase tyrA from Bacillus… · the same entry in another collection · chain A against A, TM-score 1.00

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