MolNFT v1 · #136552 · protein
Matrix metalloproteinase-13 complexed with selective inhibitor compound (R)-17A
5UWM: “Matrix metalloproteinase-13 complexed with selective inhibitor compound (R)-17A”. X-ray diffraction, 3 ligands (8OA, CA, ZN). MolNFT v1 #136552 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5UWM
- Type
- protein
- Length
- 318 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P45452
- Ligands
- 8OA, CA, ZN
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 155 | — | P45452 |
| B | — | protein | 154 | — | P45452 |
| C | — | protein | 5 | — | — |
| D | — | protein | 4 | — | — |
Ligands and binding sites
- 8OA · (R)-N-(3-methyl-1-(methylamino)-1-oxobutan-2-yl)-5-(4-(((4-oxo-4,5,6,7-tetrahydro-3H-cyclopenta[d]pyrimidin-2-yl)thio)methyl)phenyl)furan-2-carboxamide · ligand · 2 copies · chains A, B, C, D
- CA · Calcium ion · metal · 6 copies · chains A, B
- ZN · Zinc ion · metal · 4 copies · chains A, C, B, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5UWM · Matrix metalloproteinase-13 complexed with selective inhibitor compound (R)-17a · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P45452
- Elsewhere: RCSB PDB 5UWM · PDBe 5UWM · UniProt P45452
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