MolNFT v1 · #136227 · protein
Crystal structure of catechol 1,2-dioxygenase protein from burkholderia multivorans
5UMH: “Crystal structure of catechol 1,2-dioxygenase protein from burkholderia multivorans”. X-ray diffraction, 3 ligands (ZN, CA, CL). MolNFT v1 #136227 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5UMH
- Type
- protein
- Length
- 617 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A0H3KXJ8
- Ligands
- ZN, CA, CL
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 307 | — | A0A0H3KXJ8 |
| B | — | protein | 310 | — | A0A0H3KXJ8 |
Ligands and binding sites
- ZN · Zinc ion · metal · 2 copies · chains A, B
- CA · Calcium ion · metal
- CL · Chloride ion · ion · chains A
- EDO · 1,2-ethanediol · additive · 9 copies · chains A, B
- PG4 · Tetraethylene glycol · additive · 2 copies · chains A, B
- PG6 · 1-(2-methoxy-ethoxy)-2-{2-[2-(2-methoxy-ethoxy]-ethoxy}-ethane · additive · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5UMH · Crystal Structure of Catechol 1,2-dioxygenase protein from Burkholderia multivorans · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0H3KXJ8
- Elsewhere: RCSB PDB 5UMH · PDBe 5UMH · UniProt A0A0H3KXJ8
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