MolNFT v1 · #136183 · protein
Structure of cobalamin-dependent S-adenosylmethionine radical enzyme oxsb with aqua-cobalamin bound
5UL3: “Structure of cobalamin-dependent S-adenosylmethionine radical enzyme oxsb with aqua-cobalamin bound”. X-ray diffraction, 2 ligands (SF4, B12). MolNFT v1 #136183 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5UL3
- Type
- protein
- Length
- 727 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- O24770
- Ligands
- SF4, B12
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 727 | — | O24770 |
Ligands and binding sites
- SF4 · Iron/sulfur cluster · ligand · chains A
- B12 · Cobalamin · ligand · chains A
- EDO · 1,2-ethanediol · additive · 24 copies · chains A
- DTT · 2,3-dihydroxy-1,4-dithiobutane · additive · chains A
- MES · 2-(N-morpholino)-ethanesulfonic acid · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5UL3 · Structure of Cobalamin-dependent S-adenosylmethionine radical enzyme OxsB with… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O24770
- Elsewhere: RCSB PDB 5UL3 · PDBe 5UL3 · UniProt O24770
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