MolNFT v1 · #136019 · protein

Calcium bound perforin C2 domain - T431D

5UG7: “Calcium bound perforin C2 domain - T431D”. X-ray diffraction, 1 ligand (CA). MolNFT v1 #136019 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5UG7
Type: protein
Length: 126 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: P10820
Ligands: CA

Structure

x-ray diffraction · 1 distinct chain.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	126	—	P10820

Ligands and binding sites

CA · Calcium ion · metal · 3 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

5UG7 · Calcium bound Perforin C2 Domain - T431D · the same entry in another collection · chain A against A, TM-score 1.00
P10820 · AlphaFold monomer V2.0 prediction for perforin-1 (P10820) · a predicted model of the same protein · chain A against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P10820
Elsewhere: RCSB PDB 5UG7 · PDBe 5UG7 · UniProt P10820

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