MolNFT v1 · #135709 · protein

Structure of human MR1-5OH-dcf in complex with human mait a-F7 TCR

5U72: “Structure of human MR1-5OH-dcf in complex with human mait a-F7 TCR”. X-ray diffraction, 1 ligand (7ZV). MolNFT v1 #135709 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5U72
Type: protein
Length: 1,600 residues
Chains: 8
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: Q95460, P61769
Ligands: 7ZV

Structure

x-ray diffraction · 6 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	259	—	Q95460
B	—	protein	200	—	—
G, E	—	protein	243	—	—
H, F	—	protein	97	—	P61769
C	—	protein	263	—	Q95460
D	—	protein	198	—	—

Ligands and binding sites

7ZV · 5-hydroxydiclofenac · ligand · chains C, D, E
ACT · Acetate ion · additive · 3 copies · chains A, B, F
GOL · Glycerol · additive · chains A, G
DMS · Dimethyl sulfoxide · additive · chains C, D

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

5U72 · Structure of human MR1-5OH-DCF in complex with human MAIT A-F7 TCR · the same entry in another collection · chain F against F, TM-score 1.00
P61769 · AlphaFold monomer V2.0 prediction for beta-2-microglobulin (P61769) · a predicted model of the same protein · chain H against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q95460
Every structure of UniProt P61769
Elsewhere: RCSB PDB 5U72 · PDBe 5U72 · UniProt Q95460 · UniProt P61769

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