MolNFT v1 · #135571 · protein + DNA + RNA
Crystal structure of AACC2C1-sgrna-8MER substrate DNA ternary complex
5U31: “Crystal structure of AACC2C1-sgrna-8MER substrate DNA ternary complex”. X-ray diffraction, 1 ligand (SO4). MolNFT v1 #135571 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5U31
- Type
- protein + DNA + RNA
- Length
- 1,227 residues
- Chains
- 5
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- T0D7A2
- Ligands
- SO4
Structure
x-ray diffraction · 5 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 1085 | — | T0D7A2 |
| B | — | rna | 99 | — | — |
| C | — | dna | 28 | — | — |
| D | — | dna | 8 | — | — |
| E | — | dna | 7 | — | — |
Ligands and binding sites
- SO4 · Sulfate ion · ion · 2 copies · chains A, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5U31 · Crystal structure of AacC2c1-sgRNA-8mer substrate DNA ternary complex · the same entry in another collection · chain A against A, TM-score 1.00
- T0D7A2 · AlphaFold monomer V2.0 prediction for CRISPR-associated endonuclease CAS12B (T0D7A2) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt T0D7A2
- Elsewhere: RCSB PDB 5U31 · PDBe 5U31 · UniProt T0D7A2
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