MolNFT v1 · #135377 · protein

Structure of amyloid-beta derived peptide - nkgaif

5TXD · Amyloid beta A4 protein: “Structure of amyloid-beta derived peptide - nkgaif”. X-ray diffraction, 1 ligand (PO4). MolNFT v1 #135377 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5TXD
Type: protein
Length: 6 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Amyloid beta A4 protein
UniProt: P05067
Ligands: PO4

Structure

x-ray diffraction · 1 distinct chain · 0% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
Z	Amyloid beta A4 protein	protein	6	0% helix, 0% strand	P05067

Ligands and binding sites

PO4 · Phosphate ion · ion · chains Z

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

5TXD · Structure of amyloid-beta derived peptide - NKGAIF · the same entry in another collection · chain Z against Z, TM-score 1.00
P05067 · AlphaFold monomer V2.0 prediction for amyloid-beta precursor protein (P05067) · a predicted model of the same protein · chain Z against A, TM-score 0.64

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P05067
Elsewhere: RCSB PDB 5TXD · PDBe 5TXD · UniProt P05067

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