GL1X · GenesisL1 explorer

MolNFT v1 · #135344 · protein

Oxidoreductase iruo in the oxidized form

5TWC · Ferredoxin--NADP reductase: “Oxidoreductase iruo in the oxidized form”. X-ray diffraction, 1 ligand (FAD), 1 pocket (best druggability 0.74). MolNFT v1 #135344 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
5TWC
Type
protein
Length
344 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Ferredoxin--NADP reductase
EC
1.18.1.2
UniProt
Q2FEC4
Ligands
FAD
Pockets
1 · best druggability 0.74

Structure

x-ray diffraction · 1 distinct chain · 27% helix, 26% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AFerredoxin--NADP reductase (EC 1.18.1.2)protein34427% helix, 26% strandQ2FEC4

Ligands and binding sites

  • FAD · Flavin-adenine dinucleotide · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
17020.740.8086FAD

Modifications

Observed in the structure: 1 disulfide (disulfide).

Compared structures

  • 5TWC · Oxidoreductase IruO in the oxidized form · the same entry in another collection · chain A against A, TM-score 1.00
  • Q2FEC4 · AlphaFold monomer V2.0 prediction for ferredoxin--NADP reductase (Q2FEC4) · a predicted model of the same protein · chain A against A, TM-score 0.73

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