MolNFT v1 · #135226 · protein
Crystal structure of iunh from leishmania braziliensis in complex with D-ribose
5TSQ: “Crystal structure of iunh from leishmania braziliensis in complex with D-ribose”. X-ray diffraction, 2 ligands (BDR, CA), 2 pockets (best druggability 0.62). MolNFT v1 #135226 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 5TSQ
- Type
- protein
- Length
- 312 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Iunh
- EC
- 3.2.2.1
- UniProt
- A4H9Q9
- Ligands
- BDR, CA
- Pockets
- 2 · best druggability 0.62
Structure
x-ray diffraction · 1 distinct chain · 42% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Iunh (EC 3.2.2.1) | protein | 312 | 42% helix, 17% strand | A4H9Q9 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 95 | 0.62 | 0.89 | 25 | BDR |
| 2 | 50 | 0.27 | 0.74 | 14 | empty |
Compared structures
- 5TSQ · Crystal structure of IUnH from Leishmania braziliensis in complex with D-Ribose · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A4H9Q9
- Elsewhere: RCSB PDB 5TSQ · PDBe 5TSQ · UniProt A4H9Q9
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