MolNFT v1 · #135224 · protein
Crystal structure of glyceraldehyde-3-phosphate dehydrogenase from pig muscle complexed with orthophenanthroline at 1.90 ångström resolution
5TSO: “Crystal structure of glyceraldehyde-3-phosphate dehydrogenase from pig muscle complexed with…”. X-ray diffraction, 3 ligands (PHN, NAD, SO4). MolNFT v1 #135224 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5TSO
- Type
- protein
- Length
- 996 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P00355
- Ligands
- PHN, NAD, SO4
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| P, R, S | — | protein | 332 | — | P00355 |
Ligands and binding sites
- PHN · 1,10-phenanthroline · ligand · 4 copies · chains R, S
- NAD · Nicotinamide-adenine-dinucleotide · ligand · 3 copies · chains P, R, S
- SO4 · Sulfate ion · ion · 11 copies · chains P, R, S
- GOL · Glycerol · additive · 7 copies · chains P, R, S
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5TSO · Crystal structure of glyceraldehyde-3-phosphate dehydrogenase from pig muscle complexed… · the same entry in another collection · chain P against P, TM-score 1.00
- P00355 · AlphaFold monomer V2.0 prediction for glyceraldehyde-3-phosphate dehydrogenase (P00355) · a predicted model of the same protein · chain P against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P00355
- Elsewhere: RCSB PDB 5TSO · PDBe 5TSO · UniProt P00355
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