MolNFT v1 · #135136 · protein
Crystal structure of amino terminal domains of the NMDA receptor subunit GLUN1 and GLUN2B in apo closed state
5TPZ: “Crystal structure of amino terminal domains of the NMDA receptor subunit GLUN1 and GLUN2B in apo closed state”. X-ray diffraction, 1 ligand (NAG). MolNFT v1 #135136 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5TPZ
- Type
- protein
- Length
- 706 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q91977, Q00960
- Ligands
- NAG
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 354 | — | Q91977 |
| D | — | protein | 352 | — | Q00960 |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 4 copies · chains A, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5TPZ · Crystal structure of amino terminal domains of the NMDA receptor subunit GluN1 and GluN2B… · the same entry in another collection · chain A against A, TM-score 1.00
- Q00960 · AlphaFold monomer V2.0 prediction for glutamate receptor ionotropic, NMDA 2B (Q00960) · a predicted model of the same protein · chain D against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q91977
- Every structure of UniProt Q00960
- Elsewhere: RCSB PDB 5TPZ · PDBe 5TPZ · UniProt Q91977 · UniProt Q00960
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