MolNFT v1 · #134963 · protein
Crystal structure of human APOBEC3B N-terminal domain
5TKM: “Crystal structure of human APOBEC3B N-terminal domain”. X-ray diffraction, 1 ligand (ZN). MolNFT v1 #134963 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5TKM
- Type
- protein
- Length
- 368 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q9UH17
- Ligands
- ZN
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | — | protein | 184 | — | Q9UH17 |
Ligands and binding sites
- ZN · Zinc ion · metal · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5TKM · Crystal structure of human APOBEC3B N-terminal Domain · the same entry in another collection · chain A against A, TM-score 1.00
- Q9UH17 · AlphaFold monomer V2.0 prediction for DNA dc->du-editing enzyme apobec-3B (Q9UH17) · a predicted model of the same protein · chain B against A, TM-score 0.95
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9UH17
- Elsewhere: RCSB PDB 5TKM · PDBe 5TKM · UniProt Q9UH17
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