MolNFT v1 · #134940 · protein
Structure of 4-hydroxy-tetrahydrodipicolinate reductase from mycobacterium tuberculosis with 2,6 pyridine dicarboxylic acid and NADH
5TJY: “Structure of 4-hydroxy-tetrahydrodipicolinate reductase from mycobacterium tuberculosis with 2,6 pyridine…”. X-ray diffraction, 6 ligands (PDC, NAI, BEZ). MolNFT v1 #134940 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 5TJY
- Type
- protein
- Length
- 245 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A5U6C6
- Ligands
- PDC, NAI, BEZ, NA, SO4, CL
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 245 | — | A5U6C6 |
Ligands and binding sites
- PDC · Pyridine-2,6-dicarboxylic acid · ligand · chains A
- NAI · 1,4-dihydronicotinamide adenine dinucleotide · ligand · chains A
- BEZ · Benzoic acid · ligand · chains A
- NA · Sodium ion · metal · chains A
- SO4 · Sulfate ion · ion · chains A
- CL · Chloride ion · ion · chains A
- EDO · 1,2-ethanediol · additive · 6 copies · chains A
- IMD · Imidazole · additive · chains A
- PG4 · Tetraethylene glycol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- A5U6C6 · AlphaFold monomer V2.0 prediction for 4-hydroxy- tetrahydrodipicolinate reductase (A5U6C6) · a predicted model of the same protein · chain A against A, TM-score 0.85
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A5U6C6
- Elsewhere: RCSB PDB 5TJY · PDBe 5TJY · UniProt A5U6C6
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