MolNFT v1 · #134885 · protein
Crystal structure of human tdo in complex with TRP and dioxygen, northeast structural genomics consortium target HR6161
5TI9: “Crystal structure of human tdo in complex with TRP and dioxygen, northeast structural genomics consortium…”. X-ray diffraction, 3 ligands (HEM, OXY, PO4). MolNFT v1 #134885 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 5TI9
- Type
- protein
- Length
- 1,352 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P48775
- Ligands
- HEM, OXY, PO4
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 352 | — | P48775 |
| B | — | protein | 338 | — | P48775 |
| C | — | protein | 328 | — | P48775 |
| D | — | protein | 334 | — | P48775 |
Ligands and binding sites
- HEM · Protoporphyrin IX containing Fe · ligand · 4 copies · chains A, B, C, D
- OXY · Oxygen molecule · ion · 2 copies · chains A, B
- PO4 · Phosphate ion · ion · 2 copies · chains A, D, B, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- P48775 · AlphaFold monomer V2.0 prediction for tryptophan 2,3-dioxygenase (P48775) · a predicted model of the same protein · chain C against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P48775
- Elsewhere: RCSB PDB 5TI9 · PDBe 5TI9 · UniProt P48775
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