MolNFT v1 · #134526 · protein

Crystal structure of mouse cathepsin K at 2.9 ångströms resolution.

5T6U: “Crystal structure of mouse cathepsin K at 2.9 ångströms resolution.”. X-ray diffraction, 2 ligands (NAG, SO4). MolNFT v1 #134526 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5T6U
Type: protein
Length: 215 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Cathepsin K
EC: 3.4.22.38
UniProt: P55097
Ligands: NAG, SO4

Structure

x-ray diffraction · 1 distinct chain · 27% helix, 22% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Cathepsin K (EC 3.4.22.38)	protein	215	27% helix, 22% strand	P55097

Ligands and binding sites

NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · chains A
SO4 · Sulfate ion · ion · 3 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 3 disulfide, 1 glycan (disulfide, N-glycosylation).

Compared structures

5T6U · Crystal structure of mouse cathepsin K at 2.9 Angstroms resolution. · the same entry in another collection · chain A against A, TM-score 1.00
P55097 · AlphaFold monomer V2.0 prediction for cathepsin K (P55097) · a predicted model of the same protein · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P55097
Elsewhere: RCSB PDB 5T6U · PDBe 5T6U · UniProt P55097

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