MolNFT v1 · #134403 · protein
The protac MZ1 in complex with the second bromodomain of BRD4 and PVHL:ELONGINC:ELONGINB
5T35: “The protac MZ1 in complex with the second bromodomain of BRD4 and PVHL:ELONGINC:ELONGINB”. X-ray diffraction. MolNFT v1 #134403 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5T35
- Type
- protein
- Length
- 903 residues
- Chains
- 8
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- O60885, Q15370, Q15369, P40337
Structure
x-ray diffraction · 6 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, E | — | protein | 111 | — | O60885 |
| B, F | — | protein | 104 | — | Q15370 |
| C | — | protein | 87 | — | Q15369 |
| D | — | protein | 150 | — | P40337 |
| G | — | protein | 88 | — | Q15369 |
| H | — | protein | 148 | — | P40337 |
Compared structures
- 5T35 · The PROTAC MZ1 in complex with the second bromodomain of Brd4 and pVHL:ElonginC:ElonginB · the same entry in another collection · chain E against E, TM-score 1.00
- Q15370 · AlphaFold monomer V2.0 prediction for elongin-B (Q15370) · a predicted model of the same protein · chain B against A, TM-score 0.99
- Q15369 · AlphaFold monomer V2.0 prediction for elongin-C (Q15369) · a predicted model of the same protein · chain C against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O60885
- Every structure of UniProt Q15370
- Every structure of UniProt Q15369
- Every structure of UniProt P40337
- Elsewhere: RCSB PDB 5T35 · PDBe 5T35 · UniProt O60885 · UniProt Q15370 · UniProt Q15369 · UniProt P40337
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