MolNFT v1 · #134302 · protein + DNA
Human ctcf ZNF3-7 and methylated DNA complex
5T00: “Human ctcf ZNF3-7 and methylated DNA complex”. X-ray diffraction, 1 ligand (ZN). MolNFT v1 #134302 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5T00
- Type
- protein + DNA
- Length
- 354 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P49711
- Ligands
- ZN
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 143 | — | P49711 |
| B, E | — | dna | 17 | — | — |
| C, F | — | dna | 17 | — | — |
| D | — | protein | 143 | — | P49711 |
Ligands and binding sites
- ZN · Zinc ion · metal · 10 copies · chains A, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- P49711 · AlphaFold monomer V2.0 prediction for transcriptional repressor ctcf (P49711) · a predicted model of the same protein · chain A against A, TM-score 0.78
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P49711
- Elsewhere: RCSB PDB 5T00 · PDBe 5T00 · UniProt P49711
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