MolNFT v1 · #13425 · protein

TRAF6-rank complex

1LB5 · TNF receptor-associated factor 6: “TRAF6-rank complex”. X-ray diffraction. MolNFT v1 #13425 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1LB5
Type: protein
Length: 163 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: TNF receptor-associated factor 6; Receptor activator of nuclear factor-kappa B
UniProt: Q9Y4K3

Structure

x-ray diffraction · 2 distinct chains · 12% helix, 42% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	TNF receptor-associated factor 6	protein	155	13% helix, 41% strand	Q9Y4K3
B	Receptor activator of nuclear factor-kappa B	protein	8	0% helix, 50% strand	—

Interfaces

1 interface between chains.

A–B · 602 Å² buried · 13 hydrogen bonds · protein-protein

Compared structures

1LB5 · TRAF6-RANK Complex · the same entry in another collection · chain A against A, TM-score 1.00
Q9Y4K3 · AlphaFold monomer V2.0 prediction for TNF receptor-associated factor 6 (Q9Y4K3) · a predicted model of the same protein · chain A against A, TM-score 0.96

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9Y4K3
Elsewhere: RCSB PDB 1LB5 · PDBe 1LB5 · UniProt Q9Y4K3

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