MolNFT v1 · #134182 · protein
Crystal structure of SPGH92 in complex with mannose
5SWI: “Crystal structure of SPGH92 in complex with mannose”. X-ray diffraction, 2 ligands (BMA, CA). MolNFT v1 #134182 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5SWI
- Type
- protein
- Length
- 2,746 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A0Y0HIE3
- Ligands
- BMA, CA
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B | — | protein | 693 | — | A0A0Y0HIE3 |
| A | — | protein | 692 | — | A0A0Y0HIE3 |
| C | — | protein | 680 | — | A0A0Y0HIE3 |
| D | — | protein | 681 | — | A0A0Y0HIE3 |
Ligands and binding sites
- BMA · beta-D-mannopyranose · sugar · 4 copies · chains B, A, C, D
- CA · Calcium ion · metal · 4 copies · chains B, A, C, D
- GOL · Glycerol · additive · 16 copies · chains B, A, C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0Y0HIE3
- Elsewhere: RCSB PDB 5SWI · PDBe 5SWI · UniProt A0A0Y0HIE3
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