MolNFT v1 · #134128 · protein
Structure of the EXBB/EXBD complex from E. COLI at pH 7.0
5SV0: “Structure of the EXBB/EXBD complex from E. COLI at pH 7.0”. X-ray diffraction, 1 ligand (CA). MolNFT v1 #134128 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5SV0
- Type
- protein
- Length
- 2,225 residues
- Chains
- 10
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P0ABU8
- Ligands
- CA
Structure
x-ray diffraction · 9 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B, H | — | protein | 225 | — | P0ABU8 |
| C | — | protein | 222 | — | P0ABU8 |
| D | — | protein | 215 | — | P0ABU8 |
| E | — | protein | 216 | — | P0ABU8 |
| F | — | protein | 223 | — | P0ABU8 |
| G | — | protein | 229 | — | P0ABU8 |
| I | — | protein | 223 | — | P0ABU8 |
| J | — | protein | 214 | — | P0ABU8 |
| A | — | protein | 233 | — | P0ABU8 |
Ligands and binding sites
- CA · Calcium ion · metal · 2 copies · chains I
- EPE · 4-(2-hydroxyethyl)-1-piperazine ethanesulfonic acid · additive · 3 copies · chains C, D, E, F, G, I, J
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- P0ABU8 · AlphaFold monomer V2.0 prediction for biopolymer transport protein exbb (P0ABU8) · a predicted model of the same protein · chain B against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0ABU8
- Elsewhere: RCSB PDB 5SV0 · PDBe 5SV0 · UniProt P0ABU8
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