MolNFT v1 · #13387 · protein

Non structural protein encoded by gene segment 8 of rotavirus (NSP2), an NTPase, ssrna binding and nucleic acid helix-destabilizing protein

1L9V · Rotavirus-NSP2: “Non structural protein encoded by gene segment 8 of rotavirus (NSP2), an NTPase, ssrna binding and nucleic…”. X-ray diffraction, 2 pockets (best druggability 0.70). MolNFT v1 #13387 on GenesisL1: 3D structure…

PDB: 1L9V
Type: protein
Length: 313 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Rotavirus-NSP2
UniProt: Q03243
Pockets: 2 · best druggability 0.70

Structure

x-ray diffraction · 1 distinct chain · 42% helix, 15% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Rotavirus-NSP2	protein	313	42% helix, 15% strand	Q03243

Pockets

2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	651	0.70	0.78	49	empty
2	189	0.57	0.80	25	empty

Compared structures

1L9V · Non Structural protein encoded by gene segment 8 of rotavirus (NSP2), an NTPase, ssRNA… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q03243
Elsewhere: RCSB PDB 1L9V · PDBe 1L9V · UniProt Q03243

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