MolNFT v1 · #133789 · protein
DDR1, 3-[2-(6-aminopyridin-3-YL)ETHYNYL]-N-[3-(trifluoromethyl) PHENYL]BENZAMIDE, 1.800A, P212121, RFREE=23.1%
5SAU: “DDR1, 3-[2-(6-aminopyridin-3-YL)ETHYNYL]-N-[3-(trifluoromethyl) PHENYL]BENZAMIDE, 1.800A, P212121, RFREE=23.1%”. X-ray diffraction, 1 ligand (1IF). MolNFT v1 #133789 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5SAU
- Type
- protein
- Length
- 287 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q08345
- Ligands
- 1IF
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 287 | — | Q08345 |
Ligands and binding sites
- 1IF · 3-[(6-aminopyridin-3-yl)ethynyl]-N-[3-(trifluoromethyl)phenyl]benzamide · ligand · chains A
- MLI · Malonate ion · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5SAU · DDR1, 3-[2-(6-aminopyridin-3-yl)ethynyl]-N-[3-(trifluoromethyl)phenyl]benzamide, 1.800A… · the same entry in another collection · chain A against A, TM-score 1.00
- Q08345 · AlphaFold monomer V2.0 prediction for epithelial discoidin domain- containing receptor 1… · a predicted model of the same protein · chain A against A, TM-score 0.95
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q08345
- Elsewhere: RCSB PDB 5SAU · PDBe 5SAU · UniProt Q08345
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