MolNFT v1 · #132337 · protein
TGF-beta receptor type 1 kinase domain (T204D) in complex with 6-[1- (2,2-difluoroethyl)-4-(6-methylpyridin-2-yl)-1H-imidazol-5- YL]IMIDAZO[1,2-A]PYRIDINE
5QTZ · TGF-beta receptor type-1: “TGF-beta receptor type 1 kinase domain (T204D) in complex with 6-[1…”. X-ray diffraction, 1 ligand (QMY), 2 pockets (best druggability 0.76). MolNFT v1 #132337 on GenesisL1: 3D structure, binding sites and…
- PDB
- 5QTZ
- Type
- protein
- Length
- 303 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- TGF-beta receptor type-1
- EC
- 2.7.11.30
- UniProt
- P36897
- Ligands
- QMY
- Pockets
- 2 · best druggability 0.76
Structure
x-ray diffraction · 1 distinct chain · 39% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TGF-beta receptor type-1 (EC 2.7.11.30) | protein | 303 | 39% helix, 21% strand | P36897 |
Ligands and binding sites
- QMY · 6-[1-(2,2-difluoroethyl)-4-(6-methylpyridin-2-yl)-1H-imidazol-5-yl]imidazo[1,2-a]pyridine · ligand · chains A
- GOL · Glycerol · additive · 3 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 79 | 0.76 | 0.99 | 20 | empty |
| 2 | 314 | 0.69 | 0.83 | 44 | QMY |
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P36897
- Elsewhere: RCSB PDB 5QTZ · PDBe 5QTZ · UniProt P36897
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