MolNFT v1 · #131895 · protein

Pandda analysis group deposition of models with modelled events (E.G. bound ligands) -- crystal structure of human FAM83B in complex with FMOPL000554A

5QHP · Protein FAM83B: “Pandda analysis group deposition of models with modelled events (E.G. bound ligands) -- crystal structure of…”. X-ray diffraction, 1 ligand (GQM), 1 pocket (best druggability 0.31). MolNFT v1 #131895 on GenesisL1…

PDB: 5QHP
Type: protein
Length: 164 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Protein FAM83B
UniProt: Q5T0W9
Ligands: GQM
Pockets: 1 · best druggability 0.31

Structure

x-ray diffraction · 1 distinct chain · 33% helix, 30% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Protein FAM83B	protein	164	33% helix, 30% strand	Q5T0W9

Ligands and binding sites

GQM · 5-methoxy-2-(1~{H}-pyrazol-3-yl)phenol · ligand · chains A
EDO · 1,2-ethanediol · additive · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	55	0.31	0.76	13	GQM

Compared structures

Q5T0W9 · AlphaFold monomer V2.0 prediction for protein FAM83B (Q5T0W9) · a predicted model of the same protein · chain A against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q5T0W9
Elsewhere: RCSB PDB 5QHP · PDBe 5QHP · UniProt Q5T0W9

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