MolNFT v1 · #130863 · protein
Pandda analysis group deposition -- crystal structure of BRD1 in complex with N11075A
5POX: “Pandda analysis group deposition -- crystal structure of BRD1 in complex with N11075A”. X-ray diffraction, 2 ligands (8UG, NA). MolNFT v1 #130863 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5POX
- Type
- protein
- Length
- 244 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- O95696
- Ligands
- 8UG, NA
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 121 | — | O95696 |
| B | — | protein | 123 | — | O95696 |
Ligands and binding sites
- 8UG · ethyl (5S)-4,5,6,7-tetrahydro-2H-indazole-5-carboxylate · ligand · chains A
- NA · Sodium ion · metal · chains A, B
- EDO · 1,2-ethanediol · additive · 4 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5POX · PanDDA analysis group deposition -- Crystal Structure of BRD1 in complex with N11075a · the same entry in another collection · chain A against A, TM-score 1.00
- O95696 · AlphaFold monomer V2.0 prediction for bromodomain-containing protein 1 (O95696) · a predicted model of the same protein · chain B against A, TM-score 0.90
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O95696
- Elsewhere: RCSB PDB 5POX · PDBe 5POX · UniProt O95696
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