MolNFT v1 · #129747 · protein
Monomeric polcalcin (phl P 7) in complex with two identical allergen- specific antibodies
5OTJ: “Monomeric polcalcin (phl P 7) in complex with two identical allergen- specific antibodies”. X-ray diffraction, 1 ligand (CA). MolNFT v1 #129747 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5OTJ
- Type
- protein
- Length
- 1,009 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- O82040
- Ligands
- CA
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| L, A | — | protein | 214 | — | — |
| H, B | — | protein | 222 | — | — |
| D | — | protein | 68 | — | O82040 |
| C | — | protein | 69 | — | O82040 |
Ligands and binding sites
- CA · Calcium ion · metal · 4 copies · chains D, C
- EDO · 1,2-ethanediol · additive · 4 copies · chains H, A, L, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- O82040 · AlphaFold monomer V2.0 prediction for polcalcin phl P 7 (O82040) · a predicted model of the same protein · chain D against A, TM-score 0.92
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O82040
- Elsewhere: RCSB PDB 5OTJ · PDBe 5OTJ · UniProt O82040
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