MolNFT v1 · #129671 · protein
Crystal structure of BAZ2A bromodomain in complex with 1,3-dimethyl- benzimidazolone compound 1
5OR8: “Crystal structure of BAZ2A bromodomain in complex with 1,3-dimethyl- benzimidazolone compound 1”. X-ray diffraction, 1 ligand (JR4). MolNFT v1 #129671 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5OR8
- Type
- protein
- Length
- 103 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q9UIF9
- Ligands
- JR4
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 103 | — | Q9UIF9 |
Ligands and binding sites
- JR4 · ~{N}-[(4-fluorophenyl)methyl]-1,3,6-trimethyl-2-oxidanylidene-benzimidazole-5-sulfonamide · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5OR8 · Crystal Structure of BAZ2A bromodomain in complex with 1,3-dimethyl-benzimidazolone… · the same entry in another collection · chain A against A, TM-score 1.00
- Q9UIF9 · AlphaFold monomer V2.0 prediction for bromodomain adjacent to zinc finger domain protein… · a predicted model of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9UIF9
- Elsewhere: RCSB PDB 5OR8 · PDBe 5OR8 · UniProt Q9UIF9
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