GL1X · GenesisL1 explorer

MolNFT v1 · #129489 · protein

5-fluorotryptophan labeled beta-phosphoglucomutase in a closed conformation, monoclinic crystal form

5OLY: “5-fluorotryptophan labeled beta-phosphoglucomutase in a closed conformation, monoclinic crystal form”. X-ray diffraction, 3 ligands (MGF, G6P, MG). MolNFT v1 #129489 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
5OLY
Type
protein
Length
441 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P71447
Ligands
MGF, G6P, MG

Structure

x-ray diffraction · 2 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein220—P71447
G—protein221—P71447

Ligands and binding sites

  • MGF · Trifluoromagnesate · ligand · 2 copies · chains A, G
  • G6P · 6-O-phosphono-alpha-D-glucopyranose · sugar · 2 copies · chains A, G
  • MG · Magnesium ion · metal · 4 copies · chains A, G

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 5OLY · 5-fluorotryptophan labeled beta-phosphoglucomutase in a closed conformation, monoclinic… · the same entry in another collection · chain A against A, TM-score 1.00
  • P71447 · AlphaFold monomer V2.0 prediction for beta-phosphoglucomutase (P71447) · a predicted model of the same protein · chain G against A, TM-score 0.99

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