MolNFT v1 · #129409 · protein
Crystal structure of the zn-bound ubiquitin-conjugating enzyme UBE2T
5OJJ: “Crystal structure of the zn-bound ubiquitin-conjugating enzyme UBE2T”. X-ray diffraction, 1 ligand (ZN). MolNFT v1 #129409 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5OJJ
- Type
- protein
- Length
- 904 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q9NPD8
- Ligands
- ZN
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, D | — | protein | 151 | — | Q9NPD8 |
| C | — | protein | 149 | — | Q9NPD8 |
| E | — | protein | 152 | — | Q9NPD8 |
| F | — | protein | 150 | — | Q9NPD8 |
Ligands and binding sites
- ZN · Zinc ion · metal · 8 copies · chains A, C, B, E, D, F
- ACT · Acetate ion · additive · 6 copies · chains A, C, B, D, E, F
- TRS · 2-amino-2-hydroxymethyl-propane-1,3-diol · additive · 2 copies · chains A, C, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- Q9NPD8 · AlphaFold monomer V2.0 prediction for ubiquitin-conjugating enzyme E2 T (Q9NPD8) · a predicted model of the same protein · chain F against A, TM-score 0.81
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9NPD8
- Elsewhere: RCSB PDB 5OJJ · PDBe 5OJJ · UniProt Q9NPD8
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.