MolNFT v1 · #129238 · protein

Human RAB32:GDP in complex with salmonella gtge C45A mutant

5OED: “Human RAB32:GDP in complex with salmonella gtge C45A mutant”. X-ray diffraction, 2 ligands (GDP, MG). MolNFT v1 #129238 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5OED
Type: protein
Length: 360 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: Q6EAT3, Q13637
Ligands: GDP, MG

Structure

x-ray diffraction · 2 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	195	—	Q6EAT3
B	—	protein	165	—	Q13637

Ligands and binding sites

GDP · Guanosine-5'-diphosphate · ligand · chains A, B
MG · Magnesium ion · metal · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

5OED · Human Rab32:GDP in complex with Salmonella GtgE C45A mutant · the same entry in another collection · chain A against A, TM-score 1.00
Q13637 · AlphaFold monomer V2.0 prediction for RAS-related protein rab-32 (Q13637) · a predicted model of the same protein · chain B against A, TM-score 0.91

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q6EAT3
Every structure of UniProt Q13637
Elsewhere: RCSB PDB 5OED · PDBe 5OED · UniProt Q6EAT3 · UniProt Q13637

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