MolNFT v1 · #129166 · protein
Crystal structure of CD32B (Fc gamma receptor iib) in complex with human IGG1 Fab fragment (6G08)
5OCC: “Crystal structure of CD32B (Fc gamma receptor iib) in complex with human IGG1 Fab fragment (6G08)”. X-ray diffraction, 2 ligands (NAG, PO4). MolNFT v1 #129166 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5OCC
- Type
- protein
- Length
- 600 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P31994
- Ligands
- NAG, PO4
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 162 | — | P31994 |
| H | — | protein | 222 | — | — |
| L | — | protein | 216 | — | — |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 3 copies · chains A
- PO4 · Phosphate ion · ion · chains A, L
- GOL · Glycerol · additive · 2 copies · chains A, L
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- P31994 · AlphaFold monomer V2.0 prediction for low affinity immunoglobulin gamma Fc region… · a predicted model of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P31994
- Elsewhere: RCSB PDB 5OCC · PDBe 5OCC · UniProt P31994
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