MolNFT v1 · #128938 · protein

Crystal structure of the human BRPF1 bromodomain in complex with BZ053

5O5H: “Crystal structure of the human BRPF1 bromodomain in complex with BZ053”. X-ray diffraction, 2 ligands (9LK, NO3). MolNFT v1 #128938 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5O5H
Type: protein
Length: 112 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: P55201
Ligands: 9LK, NO3

Structure

x-ray diffraction · 1 distinct chain.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	112	—	P55201

Ligands and binding sites

9LK · ~{N}-[6-(4-chloranylphenoxy)pyridin-3-yl]-2,4-dimethyl-1,3-oxazole-5-carboxamide · ligand · 2 copies · chains A
NO3 · Nitrate ion · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

5O5H · Crystal structure of the human BRPF1 bromodomain in complex with BZ053 · the same entry in another collection · chain A against A, TM-score 1.00
P55201 · AlphaFold monomer V2.0 prediction for peregrin (P55201) · a predicted model of the same protein · chain A against A, TM-score 0.96

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P55201
Elsewhere: RCSB PDB 5O5H · PDBe 5O5H · UniProt P55201

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