GL1X · GenesisL1 explorer

MolNFT v1 · #128630 · protein

14-3-3C in complex with CPP7

5NWJ · 14-3-3-like protein C: “14-3-3C in complex with CPP7”. X-ray diffraction, 1 pocket (best druggability 0.49). MolNFT v1 #128630 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
5NWJ
Type
protein
Length
247 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
14-3-3-like protein C; Potassium channel KAT1
UniProt
P93343, Q39128
Pockets
1 · best druggability 0.49

Structure

x-ray diffraction · 2 distinct chains · 82% helix, 0% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
A14-3-3-like protein Cprotein24084% helix, 0% strandP93343
PPotassium channel KAT1protein70% helix, 0% strandQ39128

Ligands and binding sites

  • PGE · Triethylene glycol · additive · 2 copies · chains A
  • PEG · Di(hydroxyethyl)ether · additive · chains A
  • GOL · Glycerol · additive · chains A
  • ACT · Acetate ion · additive · chains A, P

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
11180.490.7915empty

Interfaces

1 interface between chains.

  • A–P · 611 Ų buried · 13 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 1 modified (phosphorylation).

Compared structures

  • 5NWJ · 14-3-3c in complex with CPP7 · the same entry in another collection · chain A against A, TM-score 1.00
  • P93343 · AlphaFold monomer V2.0 prediction for 14-3-3-like protein C (P93343) · a predicted model of the same protein · chain A against A, TM-score 0.98
  • Q39128 · AlphaFold monomer V2.0 prediction for potassium channel KAT1 (Q39128) · a predicted model of the same protein · chain P against A, TM-score 0.56

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