MolNFT v1 · #128630 · protein
14-3-3C in complex with CPP7
5NWJ · 14-3-3-like protein C: “14-3-3C in complex with CPP7”. X-ray diffraction, 1 pocket (best druggability 0.49). MolNFT v1 #128630 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5NWJ
- Type
- protein
- Length
- 247 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- 14-3-3-like protein C; Potassium channel KAT1
- UniProt
- P93343, Q39128
- Pockets
- 1 · best druggability 0.49
Structure
x-ray diffraction · 2 distinct chains · 82% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 14-3-3-like protein C | protein | 240 | 84% helix, 0% strand | P93343 |
| P | Potassium channel KAT1 | protein | 7 | 0% helix, 0% strand | Q39128 |
Ligands and binding sites
- PGE · Triethylene glycol · additive · 2 copies · chains A
- PEG · Di(hydroxyethyl)ether · additive · chains A
- GOL · Glycerol · additive · chains A
- ACT · Acetate ion · additive · chains A, P
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 118 | 0.49 | 0.79 | 15 | empty |
Interfaces
1 interface between chains.
- A–P · 611 Ų buried · 13 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 1 modified (phosphorylation).
Compared structures
- 5NWJ · 14-3-3c in complex with CPP7 · the same entry in another collection · chain A against A, TM-score 1.00
- P93343 · AlphaFold monomer V2.0 prediction for 14-3-3-like protein C (P93343) · a predicted model of the same protein · chain A against A, TM-score 0.98
- Q39128 · AlphaFold monomer V2.0 prediction for potassium channel KAT1 (Q39128) · a predicted model of the same protein · chain P against A, TM-score 0.56
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P93343
- Every structure of UniProt Q39128
- Elsewhere: RCSB PDB 5NWJ · PDBe 5NWJ · UniProt P93343 · UniProt Q39128
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.